1. PDB information

PDB code PDB structure
Provide a PDB identifier...  ...or your own PDB file
Example: 1BE9, 6G19, 1A4Y  

2. Network information

AACEN

energy threshold distance threshold
The contact energy threshold between two residues (default: 0). If the contact energy between two residues was less than the threshold, there is a link between them. The maximum distance between the C-alpha atom of two residues (default: 6)

NACEN

energy threshold distance threshold
The contact energy threshold between two residues (default: 0). If the contact energy between two residues was less than the threshold, there is a link between them. The maximum distance between the C-alpha atom of two residues (default: 6)
node weight type
The selection for node weight type including relative solvent accessibility (SAS), Mass, Hydrophobicity, Polarity or others. If the “others” is selected, the file contain the user defined weights should be provided.

EACEN

C-alpha

C-alpha  
   
distance threshold nudistance threshold
The maximum distance between the C-alpha atom of two residues (default: 6) The maximum distance between the represented atoms of two nucleotide (default: 7)

3. Contact information

E-mail the results (Recommended). E-mail address:

4. Commands

1. PDB information

PDB code
Provide a PDB identifier...Example: 6G19, 1A4Y  

2. Network information

AACEN

energy threshold distance threshold
The contact energy threshold between two residues (default: 0). If the contact energy between two residues was less than the threshold, there is a link between them. The maximum distance between the C-alpha atom of two residues (default: 6)

NACEN

energy threshold distance threshold
The contact energy threshold between two residues (default: 0). If the contact energy between two residues was less than the threshold, there is a link between them. The maximum distance between the C-alpha atom of two residues (default: 6)
node weight type
The selection for node weight type including relative solvent accessibility (SAS), Mass, Hydrophobicity, Polarity or others. If the “others” is selected, the file contain the user defined weights should be provided.

EACEN

C-alpha

C-alpha
   
distance threshold nudistance threshold
The maximum distance between the C-alpha atom of two residues (default: 6) The maximum distance between the represented atoms of two nucleotide (default: 7)

3. Contact information

E-mail the results (Recommended). E-mail address:

4. Commands
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